PPDB

The Plant Proteome Database

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AT3G61070.1   peroxin 11E

Lab Annot. Peroxisomal biogenesis factor 11E (PEX11E)
Mapman: 35.1 not assigned.no ontology
Curated Location peroxisome (Pubmed: 16636080 17220199 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G61070.3 11Arabidopsis thaliana6E-16923110010023 (15)S
AT3G61070.2 11Arabidopsis thaliana6E-16923110010023 (15)S
AT2G45740.2 11Arabidopsis thaliana3E-1462348493105 (96)S
Os06g03660.2 7Oryza sativa5E-125233738514 (14)S
Os03g02590.4 7Oryza sativa3E-123234718638 (38)_
Os03g02590.2 7Oryza sativa3E-123234718638 (38)_
Zm00001eb269400_P001 agpv5Zea mays9E-12523073850 (0)S
Zm00001eb269400_P007 agpv5Zea mays9E-12523073850 (0)S
v1_GRMZM2G077837_P03 4a53Zea mays9E-12523073857 (7)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PEX11(1)
TargetP: Secreted (Class 5 C0.009; M0.159; S0.416; _0.400)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 231 aa (-cTP 170)
Molecular Weight 25.51 kDA(-cTP )
PI 9.89(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2271Detail       seedlings [A. thaliana] total tissue wild-type
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

15276431(Mitochondrial proteome)
15276431(mitochondrial membranes-suspension cells)
18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19329564(peroxisomes (leaf))
21311031(mitochondria)

Comparative Proteomics Data


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