PPDB

The Plant Proteome Database

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AT3G61050.1   Calcium-dependent lipid-binding (CaLB domain) family protein

Lab Annot. NTMC2T4/NTMC2TYPE4; lipid binding
Mapman: 30.3 signalling.calcium
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G61050.2 11Arabidopsis thaliana051010010049 (30)M
AT3G61030.1 11Arabidopsis thaliana6E-15634773760 (0)M
AT3G60950.1 11Arabidopsis thaliana7E-15334971740 (0)_
Os07g22640.1 7Oryza sativa0515668416 (16)M
Os03g14700.1 7Oryza sativa051561730 (0)M
Os07g22640.2 7Oryza sativa1E-153367678414 (14)_
Zm00001eb305750_P002 agpv5Zea mays050867840 (0)M
Zm00001eb305750_P001 agpv5Zea mays050866830 (0)M
Zm00001eb010800_P002 agpv5Zea mays049565810 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: C2(1) SMP_LBD(1) Sporozoite_P67(1)
TargetP: Mitochondria (Class 5 C0.196; M0.313; S0.197; _0.045)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 510 aa (-cTP 494)
Molecular Weight 55.09 kDA(-cTP )
PI 8.22(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1494Detail       leaf [A. thaliana]  
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1579Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19106119(plasma membrane detergent resistent microdomains (DRM))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
21533090(plasmodesmata-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21988472(vacuole (unfiltered data))
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


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