PPDB

The Plant Proteome Database

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AT3G60640.1   Ubiquitin-like superfamily protein

Lab Annot. ATG8g - (ATG8/12 conjugation pathway)
Mapman: 29.5.2 protein.degradation.autophagy
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G16520.2 11Arabidopsis thaliana1E-6911782931 (1)_
AT4G16520.1 11Arabidopsis thaliana1E-6911782931 (1)_
AT2G45170.1 11Arabidopsis thaliana3E-67114819516 (15)_
Os04g53240.1 7Oryza sativa4E-6611778900 (0)_
Os04g53240.3 7Oryza sativa4E-6611778900 (0)_
Os04g53240.2 7Oryza sativa4E-6611778900 (0)_
Zm00001eb171400_P002 agpv5Zea mays4E-6611778910 (0)_
Zm00001eb171400_P003 agpv5Zea mays4E-6611778910 (0)_
GRMZM2G134613_P02 3.21Zea mays5E-66117789118 (17)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APG12(1) Atg8(1)
TargetP: Cytoplasm (Class 2 C0.045; M0.136; S0.056; _0.910)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 121 aa (-cTP 51)
Molecular Weight 13.94 kDA(-cTP )
PI 5.87(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help