PPDB

The Plant Proteome Database

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AT3G60490.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G44940.1 11Arabidopsis thaliana2E-6821956660 (0)C
AT4G32800.1 11Arabidopsis thaliana5E-4810176830 (0)_
AT5G11590.1 11Arabidopsis thaliana6E-4412461751 (1)_
Os10g41130.1 7Oryza sativa2E-4321145570 (0)C
Os04g46440.1 7Oryza sativa1E-409173840 (0)C
Os02g43970.1 7Oryza sativa9E-409668820 (0)C
Zm00001eb249470_P001 agpv5Zea mays7E-409173830 (0)C
v1_GRMZM2G056729_P01 4a53Zea mays2E-399173830 (0)C
GRMZM5G816314_P01 3.21Zea mays2E-399173830 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(2) Peptidase_S64(2)
TargetP: Chloroplast (Class 3 C0.808; M0.057; S0.023; _0.313)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 256 aa (-cTP 169)
Molecular Weight 28.22 kDA(-cTP 18.62)
PI 5.33(-cTP 4.58)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help