PPDB

The Plant Proteome Database

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AT3G60340.1   alpha/beta-Hydrolases superfamily protein

Lab Annot. palmitoyl protein thioesterase protein
Mapman: 29.1 protein.aa activation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G60340.2 11Arabidopsis thaliana033810010010 (8)S
AT5G47330.1 11Arabidopsis thaliana1E-13129358770 (0)S
AT4G17480.1 11Arabidopsis thaliana2E-12429756750 (0)S
Os03g01150.1 7Oryza sativa4E-15231464770 (0)S
Os10g41340.1 7Oryza sativa2E-15127867850 (0)S
Os03g01150.2 7Oryza sativa8E-14331461750 (0)S
GRMZM2G093880_P01 3.21Zea mays2E-15630066850 (0)S
Zm00001eb390960_P003 agpv5Zea mays2E-15630066850 (0)S
v1_GRMZM2G374779_P01 4a53Zea mays8E-15530065831 (1)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF676(2) Lipase_2(1) Palm_thioest(1)
TargetP: Secreted (Class 1 C0.018; M0.013; S0.985; _0.036)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 338 aa (-cTP 303)
Molecular Weight 37.08 kDA(-cTP )
PI 5.15(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2296Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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