PPDB

 The Plant Proteome Database

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AT3G60210.1   GroES-like family protein
Lab Annot. Cpn10-2
Mapman: 29.6 protein.folding
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G44650.1 11Arabidopsis thaliana1E-681407284411 (307)C
AT5G20720.2 11Arabidopsis thaliana8E-0912133541251 (948)C
AT5G20720.1 11Arabidopsis thaliana8E-0912133541254 (951)C
Os10g41710.1 7Oryza sativa6E-48104718732 (32)C
Os06g09679.1 7Oryza sativa2E-0894365664 (64)C
Os06g09679.2 7Oryza sativa2E-0894365664 (64)C
v1_GRMZM2G090872_P05 4a53Zea mays5E-52128627743 (43)C
GRMZM2G090872_P05 3.21Zea mays5E-52128627758 (58)C
Zm00001eb024030_P001 agpv5Zea mays3E-5112861770 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cpn10(1)
TargetP: Chloroplast (Class 1 C0.890; M0.031; S0.073; _0.040)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 138 aa (-cTP 77)
Molecular Weight 15.14 kDA(-cTP 8.32)
PI 7.74(-cTP 4.61)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1465Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clpc1 x clps (rep. 1)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1943Detail       leaf [A. thaliana] stroma WT stromawild-type
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2316Detail       leaf [A. thaliana] PG plastoglobule 
2317Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
19995723(chloroplast reference proteome)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help