PPDB

 The Plant Proteome Database

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AT3G60180.1   P-loop containing nucleoside triphosphate hydrolases superfamily protein
Lab Annot. uridine monophosphate kinase, putative
Mapman: 23.4.3 nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase
Curated Location
TAIR curated location: nucleus & cytoplasm15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G60180.2 11Arabidopsis thaliana1E-1502041001007 (4)_
AT5G26667.2 11Arabidopsis thaliana1E-103186748735 (32)_
AT5G26667.4 11Arabidopsis thaliana1E-10318674870 (0)_
Os02g53790.1 7Oryza sativa6E-99183748626 (26)_
Os02g53790.2 7Oryza sativa7E-99183748623 (23)_
Os07g43170.2 7Oryza sativa2E-97204688015 (15)_
Zm00001eb193140_P003 agpv5Zea mays5E-9718373860 (0)_
Zm00001eb193140_P002 agpv5Zea mays5E-9718373860 (0)_
GRMZM2G149281_P02 3.21Zea mays5E-97183738645 (43)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA(1) AAA_17(1) AAA_18(1) AAA_19(1) AAA_33(1) ADK(1) SRP54(1) Thymidylate_kin(2
TargetP: Cytoplasm (Class 2 C0.228; M0.072; S0.025; _0.913)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 204 aa (-cTP 147)
Molecular Weight 23.05 kDA(-cTP )
PI 5.59(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

 16242667(mature Pollen)
18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help