PPDB

PPDB	The Plant Proteome Database

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AT3G60080.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G44330.1 11 Arabidopsis thaliana 3E-25 217 37 48 0 (0) _
AT2G40830.4 11 Arabidopsis thaliana 1E-21 120 40 57 0 (0) M
AT2G40830.1 11 Arabidopsis thaliana 1E-21 120 40 57 0 (0) M
Os02g52870.1 7 Oryza sativa 1E-24 137 41 60 0 (0) M
Os10g34590.1 7 Oryza sativa 6E-23 109 38 62 5 (5) M
Os05g01940.1 7 Oryza sativa 3E-21 240 28 42 0 (0) C
v1_GRMZM2G021480_P01 4a53 Zea mays 7E-25 88 54 70 0 (0) M
GRMZM2G021480_P01 3.21 Zea mays 7E-25 88 54 70 0 (0) M
GRMZM2G053210_P02 3.21 Zea mays 3E-23 238 27 46 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DZR(2) MCM_OB(1) PHD(4) Prok-RING_4(2) zf-ANAPC11(2) zf-C3H2C3(1) zf-C3HC4(1) zf
TargetP:	Cytoplasm (Class 5 C0.512; M0.142; S0.043; _0.613)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	306 aa (-cTP 274)
Molecular Weight	33.80 kDA(-cTP )
PI	4.39(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data