PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G60040.1 F-box family protein

Lab Annot.

F-box protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G60040.3 11 Arabidopsis thaliana 0 839 99 99 0 (0) _
AT3G60040.2 11 Arabidopsis thaliana 0 666 100 100 0 (0) _
AT3G60040.5 11 Arabidopsis thaliana 0 666 99 99 0 (0) _
Os10g36190.1 7 Oryza sativa 2E-49 180 51 65 0 (0) M
Os08g01870.1 7 Oryza sativa 6E-21 136 42 58 0 (0) M
Os10g35640.1 7 Oryza sativa 9E-20 124 39 55 0 (0) M
GRMZM2G056594_P01 3.21 Zea mays 3E-44 180 47 62 0 (0) M
Zm00001eb044070_P001 agpv5 Zea mays 3E-44 180 47 62 0 (0) M
v1_GRMZM2G056594_P01 4a53 Zea mays 3E-44 180 47 62 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	F-box(1) F-box-like(1) LRR_2(1) PPR(5) PPR_1(4) PPR_2(4) PPR_3(3) PPR_long(1) RV
TargetP:	Cytoplasm (Class 4 C0.149; M0.330; S0.054; _0.611)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	838 aa (-cTP 808)
Molecular Weight	94.19 kDA(-cTP )
PI	8.45(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17151019(vacuole - suspension cell)
17216043(leaf)

Comparative Proteomics Data