PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G60020.1   SKP1-like 5

Lab Annot. SKP1-like 5
Mapman: 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G20140.1 11Arabidopsis thaliana1E-5416254700 (0)_
AT2G03170.1 11Arabidopsis thaliana4E-5415253710 (0)_
AT4G34210.1 11Arabidopsis thaliana6E-5415856721 (1)S
Os07g05160.1 7Oryza sativa7E-4515946670 (0)_
Os09g36830.1 7Oryza sativa2E-44171476617 (17)_
Os07g05180.1 7Oryza sativa6E-4115445680 (0)_
Zm00001eb146340_P001 agpv5Zea mays4E-4617147620 (0)_
Zm00001eb114920_P001 agpv5Zea mays5E-4616150640 (0)_
Zm00001eb439320_P001 agpv5Zea mays1E-4516150640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Skp1(2) Skp1_POZ(1)
TargetP: Cytoplasm (Class 3 C0.095; M0.090; S0.362; _0.793)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 153 aa (-cTP 149)
Molecular Weight 17.44 kDA(-cTP )
PI 4.63(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

14617066(Nuclear proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help