PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G59970.1   methylenetetrahydrofolate reductase 1

Lab Annot. methylenetetrahydrofolate reductase 1 (NADPH) (MTHFR1)
Mapman: 25.6 C1-metabolism.methylenetetrahydrofolate reductase
Curated Location not plastid (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G59970.3 11Arabidopsis thaliana0396100100509 (304)_
AT3G59970.2 11Arabidopsis thaliana039610010057 (42)_
AT2G44160.1 11Arabidopsis thaliana03968695235 (140)_
Os03g60090.1 7Oryza sativa0396809160 (60)_
Os03g60090.2 7Oryza sativa0396809158 (58)_
Zm00001eb062180_P001 agpv5Zea mays039680910 (0)_
Zm00001eb062180_P003 agpv5Zea mays039680910 (0)_
Zm00001eb062180_P002 agpv5Zea mays039680910 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MTHFR(1)
TargetP: Cytoplasm (Class 2 C0.069; M0.072; S0.150; _0.816)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 421 aa (-cTP 413)
Molecular Weight 47.26 kDA(-cTP )
PI 6.36(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1494Detail       leaf [A. thaliana]  
1596Detail        [A. thaliana]  
1943Detail       leaf [A. thaliana] stroma WT stromawild-type
1945Detail       leaf [A. thaliana] stroma UVR stromaUVR
1946Detail       leaf [A. thaliana] stroma UVR stromawild-type
1949Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2248Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Silique)
15815986(seedling)
15815986(Leaf)
18538804(total leaf)
19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19334764(plasma membrane (cell culture))
19888209(80S polysomal fraction)
19888209(leaves)
20166762(whole leaf)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
19423572(leaf (wt and clpr2-1))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help