PPDB

PPDB	The Plant Proteome Database

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AT3G59850.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G59850.2 11 Arabidopsis thaliana 0 388 100 100 0 (0) M
AT2G43870.1 11 Arabidopsis thaliana 0 386 81 91 0 (0) S
AT1G05660.1 11 Arabidopsis thaliana 2E-155 386 55 71 0 (0) S
Os01g43490.1 7 Oryza sativa 1E-139 391 50 69 0 (0) S
Os01g66710.1 7 Oryza sativa 2E-119 383 47 64 0 (0) S
Os11g14410.1 7 Oryza sativa 3E-108 339 48 66 0 (0) S
Zm00001eb145110_P001 agpv5 Zea mays 4E-128 394 48 65 0 (0) S
GRMZM2G026855_P01 3.21 Zea mays 4E-128 394 48 65 0 (0) S
v1_GRMZM2G026855_P01 4a53 Zea mays 4E-128 394 48 65 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) Glyco_hydro_28(1) NosD(2) Pectate_lyase_3(2)
TargetP:	Secreted (Class 1 C0.061; M0.018; S0.932; _0.046)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	388 aa (-cTP 312)
Molecular Weight	41.25 kDA(-cTP )
PI	9.13(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data