PPDB

The Plant Proteome Database

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AT3G59840.1   allyl alcohol dehydrogenase-like protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location plastid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os05g42110.1 7Oryza sativa2E-2710451620 (0)M
GRMZM2G313101_P01 3.21Zea mays8E-2710449657 (7)M
v1_GRMZM2G313101_P01 4a53Zea mays8E-2710449656 (6)M

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 4 C0.757; M0.177; S0.025; _0.378)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 97 aa (-cTP 83)
Molecular Weight 10.50 kDA(-cTP 9.01)
PI 4.65(-cTP 4.50)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1937Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1984Detail       leaf [A. thaliana] plastid wild-type
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2317Detail       leaf [A. thaliana] PG plastoglobule 
2321Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

12938931(Total chloroplast envelope)
18431481(chloroplast)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help