PPDB

PPDB	The Plant Proteome Database

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AT3G59820.1 LETM1-like protein

Lab Annot.

LEUCINE ZIPPER-EF-HAND-CONTAINING TRANSMEMBRANE PROTEIN 1 (LETM1)
Mapman: 30.3 signalling.calcium

Curated Location

mitochondria

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G59820.4 11 Arabidopsis thaliana 0 755 100 100 0 (0) M
AT3G59820.3 11 Arabidopsis thaliana 0 755 100 100 0 (0) M
AT3G59820.2 11 Arabidopsis thaliana 0 726 100 100 11 (7) M
Os02g39550.2 7 Oryza sativa 0 754 63 77 4 (4) M
Os02g39550.1 7 Oryza sativa 0 754 63 77 4 (4) M
Os04g41950.1 7 Oryza sativa 0 764 62 77 4 (4) M
Zm00001eb078520_P001 agpv5 Zea mays 0 751 62 76 0 (0) M
Zm00001eb246700_P001 agpv5 Zea mays 0 756 62 76 0 (0) M
GRMZM2G160801_P01 3.21 Zea mays 0 779 56 69 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Apo-CIII(2) EF-hand_1(1) EF-hand_5(1) EF-hand_6(2) EF-hand_7(1) LETM1(1)
TargetP:	Mitochondria (Class 3 C0.011; M0.666; S0.068; _0.175)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	755 aa (-cTP 705)
Molecular Weight	85.73 kDA(-cTP )
PI	6.31(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
2269	Detail								seedlings [A. thaliana]	total tissue	wild-type
2273	Detail								seedlings [A. thaliana]	total tissue	wild-type
2603	Detail								Rosettes [A. thaliana]	total leaf tissue	clpc1
2604	Detail								Rosettes [A. thaliana]	Total leaf tissue	clpc1

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
15276431(Mitochondrial proteome)
15815986(Silique)
16618929(MITO/PLASTID-LOPIT-callus)
15276431(mitochondrial membranes-suspension cells)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21311031(lysine-acetylated leaf)
21311031(mitochondria)
21173025(root proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data