PPDB

 The Plant Proteome Database

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AT3G59520.1   RHOMBOID-like protein 13
Lab Annot. rhomboid protease 13 (AtRBL13) or AtRBL12
Mapman: 29.5.5.10* protein.degradation.serine protease ST.S54
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G58460.2 11Arabidopsis thaliana4E-1229425440 (0)_
AT3G58460.1 11Arabidopsis thaliana4E-1228924430 (0)_
AT3G17611.1 11Arabidopsis thaliana8E-0914131510 (0)M
Os01g67040.2 7Oryza sativa8E-13726972860 (0)_
Os01g67040.1 7Oryza sativa8E-13726972860 (0)_
Os03g44830.3 7Oryza sativa7E-0819727470 (0)_
v1_GRMZM2G329325_P01 4a53Zea mays3E-13227370850 (0)_
GRMZM2G329325_P01 3.21Zea mays3E-13227370850 (0)_
Zm00001eb365770_P001 agpv5Zea mays3E-13227370850 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Rhomboid(1)
TargetP: Cytoplasm (Class 2 C0.023; M0.160; S0.139; _0.857)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 7 TMs
TAT position:
Length 269 aa (-cTP 248)
Molecular Weight 29.64 kDA(-cTP )
PI 8.71(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help