PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G59510.1   Leucine-rich repeat (LRR) family protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G15320.1 11Arabidopsis thaliana4E-60391345212 (11)S
AT5G66330.1 11Arabidopsis thaliana3E-5239533490 (0)S
AT4G03010.1 11Arabidopsis thaliana5E-5238333530 (0)S
Os02g43250.1 7Oryza sativa1E-4540331490 (0)S
Os05g33690.3 7Oryza sativa4E-4338032500 (0)S
Os05g33690.1 7Oryza sativa4E-4338032500 (0)S
Zm00001eb186170_P001 agpv5Zea mays2E-5139634490 (0)S
v1_GRMZM2G065021_P01 4a53Zea mays2E-5139634490 (0)S
GRMZM2G065021_P01 3.21Zea mays2E-5139634490 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LRR_1(10) LRR_4(7) LRR_8(6) LRR_9(3)
TargetP: Secreted (Class 3 C0.379; M0.022; S0.896; _0.005)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 419 aa (-cTP 382)
Molecular Weight 46.47 kDA(-cTP )
PI 7.05(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to flower)
19200160(flower-stage 12)
19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help