PPDB

The Plant Proteome Database

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AT3G59280.1   Protein Transporter%2C Pam16

Lab Annot. J-domain protein Dj3B (type 4) also Pam16
Mapman: 26.29* misc. DnaJ domain with unknown function
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G59280.2 11Arabidopsis thaliana6E-781121001000 (0)M
AT5G61880.2 11Arabidopsis thaliana3E-5010873810 (0)S
AT5G61880.1 11Arabidopsis thaliana3E-5010873810 (0)S
Os10g33910.1 7Oryza sativa7E-5611670870 (0)S
Os01g73020.1 6Oryza sativa1E-5311668830 (0)M
GRMZM2G048434_P07 3.21Zea mays1E-5411568831 (1)S
Zm00001eb045680_P001 agpv5Zea mays1E-5411568830 (0)S
Zm00001eb143680_P001 agpv5Zea mays2E-5310871870 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ATC_hydrolase(1) Pam16(1) Scm3(1)
TargetP: Mitochondria (Class 4 C0.028; M0.662; S0.359; _0.015)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 116 aa (-cTP 87)
Molecular Weight 12.68 kDA(-cTP )
PI 9.56(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(MITO/PLASTID-LOPIT-callus)
21311031(mitochondria)
21515685(GreenCut2)

Comparative Proteomics Data


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