PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G59010.1   pectin methylesterase 61
Lab Annot. pectin methylesterase 61 (PME61)
Mapman: 10.8.99 cell wall.pectin*esterases.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G43050.1 11Arabidopsis thaliana053867790 (0)S
AT2G45220.1 11Arabidopsis thaliana2E-139532456024 (7)S
AT5G53370.1 11Arabidopsis thaliana3E-13348045603 (0)_
Os02g54190.1 7Oryza sativa2E-14649448630 (0)M
Os01g21034.1 7Oryza sativa2E-125426496218 (18)_
Os01g13320.1 7Oryza sativa2E-12247344580 (0)_
Zm00001eb112510_P001 agpv5Zea mays2E-14451848630 (0)S
v1_GRMZM2G158240_P01 4a53Zea mays5E-14451848631 (1)M
GRMZM2G158240_P01 3.21Zea mays5E-14451848631 (1)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PDEase_I_N(1) Pectate_lyase_3(1) Pectinesterase(1) PMEI(1)
TargetP: Secreted (Class 4 C0.051; M0.019; S0.298; _0.020)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 529 aa (-cTP 525)
Molecular Weight 57.51 kDA(-cTP )
PI 9.00(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2302Detail        [A. thaliana] Clp C1 WT
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 15815986(Silique)
15276459(trichomes)
17216043(leaf)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help