PPDB

PPDB	The Plant Proteome Database

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AT3G58990.1 isopropylmalate isomerase 1

Lab Annot.

3-isopropylmalate isomerase 1 (IMI1/SSU 3) - most likely involved in Met-derived glucosinolate synthesis
Mapman: 13.1.4.4 amino acid metabolism.synthesis.branched chain group.leucine specific

Curated Location

plastid stroma (Pubmed: 23198870 19597944 20663849 19542295 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G43090.1 11 Arabidopsis thaliana 6E-116 256 70 81 455 (319) C
AT2G43100.1 11 Arabidopsis thaliana 1E-106 250 65 76 59 (41) C
AT2G43090.2 11 Arabidopsis thaliana 2E-87 256 58 68 296 (180) C
Os02g43830.1 7 Oryza sativa 1E-75 190 66 78 41 (41) C
Os02g43830.2 7 Oryza sativa 1E-75 190 66 78 41 (41) C
Zm00001eb249330_P001 agpv5 Zea mays 2E-84 183 68 80 0 (0) C
Zm00001eb249330_P002 agpv5 Zea mays 2E-84 183 68 80 0 (0) C
Zm00001eb249330_P003 agpv5 Zea mays 2E-84 183 68 80 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Aconitase_2_N(1) Aconitase_C(1)
TargetP:	Chloroplast (Class 1 C0.945; M0.035; S0.019; _0.028)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	253 aa (-cTP 197)
Molecular Weight	27.21 kDA(-cTP 21.14)
PI	6.44(-cTP 5.28)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
351	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1409	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	wild-type
1411	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	clpr2-1
1941	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1942	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1943	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1948	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1949	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
2001	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS1
2116	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)

Comparative Proteomics Data