PPDB

PPDB	The Plant Proteome Database

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AT3G58820.1 F-box/RNI-like superfamily protein

Lab Annot.

F-box/RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G13960.2 11 Arabidopsis thaliana 1E-165 475 56 67 0 (0) _
AT4G13960.1 11 Arabidopsis thaliana 1E-165 475 56 67 0 (0) _
AT1G52650.1 11 Arabidopsis thaliana 5E-163 470 54 67 0 (0) _
Os11g09620.1 6 Oryza sativa 5E-10 123 32 53 0 (0) _
Os11g10330.1 7 Oryza sativa 9E-10 124 32 51 0 (0) _
Os10g03910.1 7 Oryza sativa 1E-09 187 27 47 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	F-box(1) F-box-like(1) FBD(3)
TargetP:	Cytoplasm (Class 5 C0.072; M0.136; S0.407; _0.593)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	413 aa (-cTP 391)
Molecular Weight	47.33 kDA(-cTP )
PI	5.03(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1197	Detail								leaf [A. thaliana]	co-IP ClpR2 stroma	clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data