PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G58790.1   galacturonosyltransferase 15

Lab Annot. galacturonosyltransferase 15
Mapman: 26.2 misc.UDP glucosyl and glucoronyl transferases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G58790.2 11Arabidopsis thaliana04081001000 (0)M
AT5G15470.1 11Arabidopsis thaliana3E-14851146650 (0)_
AT3G01040.3 11Arabidopsis thaliana4E-14754644630 (0)_
Os12g38930.1 7Oryza sativa3E-14750945660 (0)_
Os03g11330.1 7Oryza sativa7E-13350144630 (0)C
Os01g52710.1 7Oryza sativa2E-12052140600 (0)C
v1_GRMZM2G179838_P01 4a53Zea mays7E-14753443640 (0)M
Zm00001eb029710_P001 agpv5Zea mays7E-14753443640 (0)M
Zm00001eb136190_P002 agpv5Zea mays8E-14353942630 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_transf_24(1) Glyco_transf_8(1)
TargetP: Cytoplasm (Class 3 C0.108; M0.029; S0.010; _0.669)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 540 aa (-cTP 504)
Molecular Weight 60.62 kDA(-cTP )
PI 8.85(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1414Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR2 wild-type
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help