PPDB

PPDB	The Plant Proteome Database

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AT3G58750.1 citrate synthase 2

Lab Annot.

CSY2 (CITRATE SYNTHASE 2); citrate (SI)-synthase
Mapman: 6.1 gluconeogenese/ glyoxylate cycle.citrate synthase

Curated Location

peroxisome (Pubmed: 15923350 )

TAIR curated location: peroxisome15923350

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G42790.1 11 Arabidopsis thaliana 0 513 86 92 71 (43) _
AT3G58740.1 11 Arabidopsis thaliana 0 485 81 89 3 (0) _
AT3G60100.2 11 Arabidopsis thaliana 2E-27 376 27 46 0 (0) M
Os02g13840.1 7 Oryza sativa 0 505 79 88 22 (22) S
Os02g10070.1 7 Oryza sativa 3E-25 393 25 45 27 (27) M
Os02g10070.2 7 Oryza sativa 3E-25 393 25 45 27 (27) M
Zm00001eb239300_P005 agpv5 Zea mays 0 370 84 92 0 (0) _
Zm00001eb239300_P002 agpv5 Zea mays 0 398 79 86 0 (0) M
Zm00001eb239300_P004 agpv5 Zea mays 0 336 84 91 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Citrate_synt(1) PKS_DE(2)
TargetP:	Secreted (Class 3 C0.008; M0.220; S0.755; _0.145)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	514 aa (-cTP 504)
Molecular Weight	56.60 kDA(-cTP )
PI	8.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
325	Detail								BY2 cell suspension [Tobacco]	cell wall enriched	wild-type
1207	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1208	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1651	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	wild-type
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2269	Detail								seedlings [A. thaliana]	total tissue	wild-type
2273	Detail								seedlings [A. thaliana]	total tissue	wild-type
2315	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2321	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19329564(peroxisomes (leaf))
19114538(guard cells Arabidopsis leaf)
21533090(plasmodesmata-crude)
21311031(mitochondria)
21841088(mitochondria (2DE native gel))

Comparative Proteomics Data