PPDB

PPDB	The Plant Proteome Database

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AT3G58720.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G58720.4 11 Arabidopsis thaliana 1E-172 258 91 91 0 (0) _
AT3G58720.2 11 Arabidopsis thaliana 1E-147 222 90 93 0 (0) C
AT3G58720.3 11 Arabidopsis thaliana 6E-134 206 90 92 0 (0) C
Os09g17610.1 7 Oryza sativa 5E-20 141 33 55 0 (0) _
Os01g16950.1 7 Oryza sativa 4E-14 65 46 56 0 (0) S
Os10g34590.1 7 Oryza sativa 4E-13 55 45 58 5 (5) M
Zm00001eb098400_P002 agpv5 Zea mays 2E-18 114 36 51 0 (0) _
GRMZM2G037131_P01 3.21 Zea mays 2E-18 114 36 51 0 (0) _
v1_GRMZM2G037131_P01 4a53 Zea mays 2E-18 114 36 51 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) GAGA(2) PHD(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) Vps39_2(1) zf-A
TargetP:	Chloroplast (Class 5 C0.338; M0.080; S0.074; _0.194)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	238 aa (-cTP 159)
Molecular Weight	27.20 kDA(-cTP 18.09)
PI	8.77(-cTP 6.31)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data