PPDB

The Plant Proteome Database

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AT3G58660.1   Ribosomal protein L1p/L10e family

Lab Annot. 60S ribosomal protein-related
Mapman: 29.2.1.2.2.99 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G42650.1 11Arabidopsis thaliana3E-14742056680 (0)_
AT1G06380.1 11Arabidopsis thaliana3E-892625170369 (369)C
AT2G27530.2 11Arabidopsis thaliana1E-061032748208 (132)_
Os05g48422.1 7Oryza sativa2E-6428141582 (2)_
Os04g42200.1 7Oryza sativa3E-1024727420 (0)M
Os08g44450.2 7Oryza sativa2E-06102274839 (39)_
GRMZM2G083738_P01 3.21Zea mays2E-7034637570 (0)C
Zm00001eb343350_P001 agpv5Zea mays2E-7034637570 (0)C
Zm00001eb343350_P003 agpv5Zea mays2E-7034637570 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ribosomal_L1(2)
TargetP: Chloroplast (Class 3 C0.754; M0.205; S0.036; _0.129)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 446 aa (-cTP 429)
Molecular Weight 49.97 kDA(-cTP 48.13)
PI 9.57(-cTP 9.60)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1457Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1481Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
17432890(leaf total membranes)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help