PPDB

The Plant Proteome Database

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AT3G58590.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot. Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G02330.1 11Arabidopsis thaliana9E-11170730520 (0)M
AT1G16480.2 11Arabidopsis thaliana2E-10571930490 (0)_
AT1G16480.1 11Arabidopsis thaliana2E-10571930490 (0)M
Os01g55070.1 7Oryza sativa1E-14564737580 (0)C
Os12g36620.1 7Oryza sativa4E-11068631500 (0)_
Os04g43430.2 7Oryza sativa8E-10469130510 (0)M
v1_GRMZM2G352234_P01 4a53Zea mays2E-14465436570 (0)C
Zm00001eb152880_P003 agpv5Zea mays2E-14465436570 (0)C
Zm00001eb152880_P002 agpv5Zea mays2E-14465436570 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PPR(15) PPR_1(15) PPR_2(15) PPR_3(10) PPR_long(6) TPR_7(4)
TargetP: Cytoplasm (Class 4 C0.221; M0.110; S0.094; _0.565)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 741 aa (-cTP 715)
Molecular Weight 82.69 kDA(-cTP )
PI 6.65(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help