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AT3G58570.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
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| Lab Annot. |
DEAD box RNA helicase (RH52)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase |
| Curated Location |
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
DEAD(1) Helicase_C(2) ResIII(1) |
| TargetP: |
Chloroplast (Class 3 C0.776; M0.097; S0.058; _0.311) |
| Predotar: |
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| Subcel. Location: |
Stroma |
| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
646 aa (-cTP 609) |
| Molecular Weight |
69.24 kDA(-cTP 65.18) |
| PI |
7.67(-cTP 7.11) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 325 | Detail | | | | | | | | BY2 cell suspension [Tobacco] | cell wall enriched | wild-type |
| 1401 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1424 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 1) |
| 1425 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 2) |
| 1439 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | wild-type (rep. 1) |
| 1440 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | wild-type (rep. 2) |
| 1442 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 1) |
| 1443 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 2) |
| 1446 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (3 day HL) | wild-type (rep. 2) |
| 1449 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (3 day HL) | abck2xabck3 (rep. 2) |
| 1529 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 0 uM CAP | wild-type (rep. 1) |
| 1539 | Detail | | | | | | | | leaf [A. thaliana] | | wild-type |
| 2182 | Detail | | | | | | | | Rosettes [A. thaliana] | total soluble | tic40 and wt |
| 2183 | Detail | | | | | | | | Rosettes [A. thaliana] | total soluble | tic40 and wt |
| 2241 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2242 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2243 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2246 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2247 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | atg5 |
| 2252 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2255 | Detail | | | | | | | | leaf [A. thaliana] | total seedlings | gfs9 |
| 2258 | Detail | | | | | | | | leaf [A. thaliana] | total seedlings | gfs9 |
| 2259 | Detail | | | | | | | | leaf [A. thaliana] | total seedlings | gfs9 |
| 2289 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2297 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2299 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2300 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2301 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2307 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2312 | Detail | | | | | | | | leaf [A. thaliana] | thylakoids thylakoid membrane | |
| 2324 | Detail | | | | | | | | leaf [A. thaliana] | THYLAKOIDS thylakoid membrane | |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)
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Comparative Proteomics Data
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