PPDB

PPDB	The Plant Proteome Database

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AT3G58250.1 TRAF-like family protein

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G58360.1 11 Arabidopsis thaliana 5E-113 314 54 71 1 (1) _
AT3G58270.1 11 Arabidopsis thaliana 5E-103 350 50 63 0 (0) _
AT3G58270.3 11 Arabidopsis thaliana 5E-103 350 50 63 0 (0) _
Os12g30540.1 7 Oryza sativa 9E-33 116 50 69 28 (28) _
Os01g56490.1 7 Oryza sativa 3E-28 165 37 58 1 (1) _
Os12g40520.1 7 Oryza sativa 3E-18 129 36 58 0 (0) _
Zm00001eb408670_P002 agpv5 Zea mays 1E-37 132 49 68 0 (0) _
Zm00001eb408670_P001 agpv5 Zea mays 4E-36 132 49 68 0 (0) _
Zm00001eb132880_P001 agpv5 Zea mays 7E-35 165 44 63 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	APG6_N(1) Crescentin(1) DUF1828(1) DUF724(1) GAS(1) MATH(1) PEARLI-4(1) Seryl_tR
TargetP:	Cytoplasm (Class 4 C0.020; M0.055; S0.457; _0.709)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	317 aa (-cTP 276)
Molecular Weight	36.18 kDA(-cTP )
PI	5.61(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data