PPDB

PPDB	The Plant Proteome Database

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AT3G57980.1 DNA-binding bromodomain-containing protein

Lab Annot.

Mapman: 27.3.42 RNA.regulation of transcription.Bromodomain proteins

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G57980.2 11 Arabidopsis thaliana 0 652 99 99 0 (0) _
AT2G42150.1 11 Arabidopsis thaliana 1E-149 685 48 59 0 (0) _
AT3G60110.1 11 Arabidopsis thaliana 3E-55 665 32 46 1 (1) _
Os08g39980.1 7 Oryza sativa 5E-27 129 48 62 0 (0) C
Os07g37800.1 7 Oryza sativa 5E-23 408 25 47 0 (0) _
Os09g31454.1 7 Oryza sativa 9E-21 130 48 62 0 (0) _
Zm00001eb035050_P002 agpv5 Zea mays 2E-54 448 37 49 0 (0) _
v1_GRMZM2G022499_P01 4a53 Zea mays 2E-54 448 37 49 0 (0) _
GRMZM2G022499_P01 3.21 Zea mays 2E-49 473 35 47 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Bromodomain(1) DUF641(1) Myb_DNA-bind_4(1) Myb_DNA-bind_5(1) Myb_DNA-binding(1)
TargetP:	Cytoplasm (Class 2 C0.280; M0.035; S0.037; _0.880)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	650 aa (-cTP 609)
Molecular Weight	72.31 kDA(-cTP )
PI	9.23(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data