PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G57920.1   squamosa promoter binding protein-like 15

Lab Annot.
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G42200.1 11Arabidopsis thaliana1E-9336850580 (0)_
AT1G02065.1 11Arabidopsis thaliana3E-3111454640 (0)_
AT5G43270.2 11Arabidopsis thaliana8E-3112748620 (0)_
Os09g31438.1 7Oryza sativa1E-3926038480 (0)_
Os08g39890.1 7Oryza sativa6E-3526836440 (0)_
Os06g49010.5 7Oryza sativa7E-3516543610 (0)_
GRMZM2G307588_P01 3.21Zea mays3E-4226841490 (0)_
v1_GRMZM2G307588_P01 4a53Zea mays3E-4226841490 (0)_
Zm00001eb316740_P001 agpv5Zea mays3E-4226841490 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SBP(1)
TargetP: Cytoplasm (Class 5 C0.481; M0.071; S0.011; _0.599)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 354 aa (-cTP 296)
Molecular Weight 39.67 kDA(-cTP )
PI 9.11(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help