PPDB

PPDB	The Plant Proteome Database

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AT3G57880.1 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein

Lab Annot.

C2 domain-containing protein
Mapman: 35.1.19 not assigned.no ontology.C2 domain-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G57880.4 11 Arabidopsis thaliana 0 773 100 100 0 (0) _
AT3G57880.3 11 Arabidopsis thaliana 0 773 100 100 0 (0) _
AT3G57880.2 11 Arabidopsis thaliana 0 773 100 100 0 (0) _
Os05g30750.7 7 Oryza sativa 0 775 84 93 0 (0) _
Os05g30750.3 7 Oryza sativa 0 775 84 93 0 (0) _
Os05g30750.6 7 Oryza sativa 0 775 84 93 0 (0) _
v1_GRMZM2G108149_P02 4a53 Zea mays 0 776 82 91 34 (34) _
GRMZM2G108149_P02 3.21 Zea mays 0 776 82 91 26 (26) _
GRMZM2G108149_P01 3.21 Zea mays 0 776 82 91 26 (26) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C2(3) DUF3292(2) DUF639(2) Pex24p(2) PRT_C(2) Reticulon(2)
TargetP:	Cytoplasm (Class 2 C0.052; M0.252; S0.095; _0.900)
Predotar:
Subcel. Location:
TM-HMM prediction:	3 TMs
Aramemnon:	3 TMs
TAT position:
Length	773 aa (-cTP 749)
Molecular Weight	89.19 kDA(-cTP )
PI	9.11(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
1432	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1486	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

16287169(Cell Wall proteome)
16618929(ER-LOPIT-callus)
19525416(leaf (wt and clpr4-1 mutant))
21533090(plasmodesmata-crude)

Comparative Proteomics Data