PPDB

 The Plant Proteome Database

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AT3G57870.1   sumo conjugation enzyme 1
Lab Annot. sumo conjugation enzyme 1
Mapman: 29.5.11.3 protein.degradation.ubiquitin.E2
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G02760.2 11Arabidopsis thaliana3E-3414540550 (0)M
AT2G02760.3 11Arabidopsis thaliana3E-3414540550 (0)M
AT2G02760.4 11Arabidopsis thaliana3E-3414540550 (0)M
Os03g03130.1 7Oryza sativa3E-10816088947 (7)M
Os10g39120.1 7Oryza sativa1E-10516085931 (1)M
Os10g39120.2 7Oryza sativa2E-8212785941 (1)_
GRMZM2G063931_P01 3.21Zea mays3E-10916090952 (2)M
Zm00001eb403740_P001 agpv5Zea mays3E-10916090950 (0)M
Zm00001eb403740_P002 agpv5Zea mays3E-10916090950 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Prok-E2_B(1) UQ_con(1)
TargetP: Mitochondria (Class 5 C0.038; M0.700; S0.027; _0.647)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 160 aa (-cTP 150)
Molecular Weight 17.99 kDA(-cTP )
PI 8.33(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2600Detail       rosettes [A. thaliana] total leaf tissue fmtclpc1
2602Detail       Rosettes [A. thaliana] total leaf tissue clpc1

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)
20813957(SUMO proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help