PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G57810.1   Cysteine proteinases superfamily protein
Lab Annot. Cysteine proteinase (OTU4)
Mapman: 29.5.3.1.5* protein.degradation.cysteine protease.CA.C85
Curated Location peroxisome (Pubmed: 21487095 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G57810.2 11Arabidopsis thaliana3E-157214991003 (1)C
AT3G57810.4 11Arabidopsis thaliana3E-157214991000 (0)C
AT3G57810.3 11Arabidopsis thaliana3E-157214991003 (1)C
Os08g39560.1 7Oryza sativa6E-195567810 (0)M
Os09g31280.2 7Oryza sativa2E-1896456316 (16)M
Os09g31280.1 7Oryza sativa2E-1896456316 (16)M
GRMZM5G839014_P02 3.21Zea mays4E-2111547580 (0)_
Zm00001eb034890_P002 agpv5Zea mays2E-2011547580 (0)M
GRMZM5G839014_P04 3.21Zea mays2E-2011547580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: OTU(2)
TargetP: Chloroplast (Class 4 C0.639; M0.279; S0.002; _0.202)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 217 aa (-cTP 160)
Molecular Weight 24.18 kDA(-cTP 17.84)
PI 9.65(-cTP 9.26)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2300Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 19200160(flower-stage 12)
21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help