PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G57800.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G57800.2 11Arabidopsis thaliana042688880 (0)_
AT2G42300.1 11Arabidopsis thaliana2E-14042761660 (0)_
AT2G42300.4 11Arabidopsis thaliana5E-11633764700 (0)_
Os06g16400.1 7Oryza sativa1E-3117042570 (0)_
Os06g16400.2 7Oryza sativa1E-3117042570 (0)_
Os09g32510.5 7Oryza sativa5E-3116145560 (0)_
v1_GRMZM2G378653_P02 4a53Zea mays5E-4735738480 (0)C
GRMZM2G378653_P02 3.21Zea mays5E-4735738480 (0)C
Zm00001eb388300_P001 agpv5Zea mays7E-4335637460 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HLH(1)
TargetP: Cytoplasm (Class 2 C0.052; M0.218; S0.010; _0.893)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 426 aa (-cTP 416)
Molecular Weight 46.58 kDA(-cTP )
PI 5.92(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 20813957(SUMO proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help