PPDB

PPDB	The Plant Proteome Database

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AT3G57510.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G41850.1 11 Arabidopsis thaliana 0 434 69 80 6 (6) S
AT3G07970.1 11 Arabidopsis thaliana 2E-135 435 46 65 0 (0) S
AT1G23460.2 11 Arabidopsis thaliana 3E-110 368 45 64 0 (0) _
Os07g10680.1 7 Oryza sativa 5E-131 394 53 68 0 (0) S
Os07g10700.1 7 Oryza sativa 8E-131 376 52 69 0 (0) S
Os07g10740.1 7 Oryza sativa 1E-130 409 49 64 0 (0) S
Zm00001eb061780_P001 agpv5 Zea mays 2E-140 373 53 71 0 (0) S
GRMZM2G111609_P01 3.21 Zea mays 2E-140 373 53 71 0 (0) S
v1_GRMZM2G111609_P01 4a53 Zea mays 2E-140 373 53 71 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	End_N_terminal(2) Glyco_hydro_28(2) Pectate_lyase_3(2)
TargetP:	Secreted (Class 1 C0.002; M0.140; S0.986; _0.008)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	431 aa (-cTP 411)
Molecular Weight	46.57 kDA(-cTP )
PI	8.20(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data