PPDB

The Plant Proteome Database

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AT3G57350.1   Nucleoporin interacting component (Nup93/Nic96-like) family protein

Lab Annot. Nucleoporin Nup93b
Mapman: 29.3.1 protein.targeting.nucleus
Curated Location nucleus (Pubmed: 21189294 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G41620.1 11Arabidopsis thaliana086284914 (3)_
Os03g22690.1 7Oryza sativa0861648016 (16)_
GRMZM2G052148_P01 3.21Zea mays085763807 (7)C
v1_GRMZM2G052148_P01 4a53Zea mays0857638030 (30)C
Zm00001eb016760_P002 agpv5Zea mays085763800 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AbiEi_3_N(1) Nic96(1)
TargetP: Cytoplasm (Class 5 C0.514; M0.077; S0.014; _0.690)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 860 aa (-cTP 812)
Molecular Weight 96.42 kDA(-cTP )
PI 6.55(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help