PPDB

PPDB	The Plant Proteome Database

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AT3G57300.1 DNA helicase INO80-like protein

Lab Annot.

INO80 ortholog of the SWI/SNF ATPase family
Mapman: 28.99 DNA.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G57300.4 11 Arabidopsis thaliana 0 1507 100 100 0 (0) _
AT3G57300.2 11 Arabidopsis thaliana 0 1540 97 97 1 (1) _
AT3G57300.3 11 Arabidopsis thaliana 0 1239 100 100 0 (0) _
Os03g22900.1 7 Oryza sativa 0 1508 55 70 1 (1) M
Os01g27040.1 7 Oryza sativa 6E-71 328 39 60 4 (4) _
ChrUn.fgenesh.mRNA.85 7 Oryza sativa 8E-71 328 39 60 0 (0)
GRMZM2G469162_P01 3.21 Zea mays 0 1403 58 72 0 (0) M
Zm00001eb017000_P001 agpv5 Zea mays 0 1332 60 74 0 (0) _
Zm00001eb394610_P002 agpv5 Zea mays 0 1333 60 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DBINO(2) HDA2-3(3) Helicase_C(1) ResIII(2) SNF2_N(1)
TargetP:	Cytoplasm (Class 3 C0.126; M0.180; S0.072; _0.758)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1507 aa (-cTP 1454)
Molecular Weight	172.17 kDA(-cTP )
PI	8.97(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2321	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data