PPDB

The Plant Proteome Database

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AT3G57240.1   beta-1%2C3-glucanase 3

Lab Annot. BG3 (BETA-1,3-GLUCANASE 3); hydrolase, hydrolyzing O-glycosyl compounds
Mapman: 26.4 misc.beta 1,3 glucan hydrolases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G57260.2 11Arabidopsis thaliana2E-14634562750 (0)M
AT3G57260.1 11Arabidopsis thaliana1E-1453366376241 (60)S
AT3G57270.1 11Arabidopsis thaliana5E-12831558750 (0)S
Os01g71400.1 7Oryza sativa3E-10834249660 (0)S
Os01g71340.1 7Oryza sativa2E-10632850660 (0)S
Os01g71830.1 7Oryza sativa7E-9731651660 (0)_
Zm00001eb141540_P001 agpv5Zea mays1E-10831651680 (0)S
GRMZM2G065585_P01 3.21Zea mays1E-10831651680 (0)S
v1_GRMZM2G065585_P01 4a53Zea mays1E-10831651686 (6)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_17(1)
TargetP: Secreted (Class 1 C0.007; M0.033; S0.980; _0.015)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 341 aa (-cTP 293)
Molecular Weight 37.63 kDA(-cTP )
PI 8.45(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
310Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-TAPlong
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

15593128(Cell Wall proteome)
15815986(Silique)
18538804(apoplast)
18436743(specific to siliques)
17216043(leaf)
WallDB-E.Jamet(cell wall reference proteome)
21413152(Xylem-sap (BrassicaOleracea))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help