PPDB

 The Plant Proteome Database

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AT3G57190.1   peptide chain release factor
Lab Annot. Ribosomal peptide release factor B3 (PrfB3) - petB mRNA
Mapman: 29.2.5 protein.synthesis.release
Curated Location plastid stroma (Pubmed: 23198870 21771930 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G36170.2 11Arabidopsis thaliana3E-58370315680 (45)C
AT5G36170.1 11Arabidopsis thaliana3E-58370315680 (45)C
AT5G36170.3 11Arabidopsis thaliana6E-35301285178 (45)C
Os05g31160.1 7Oryza sativa1E-10640245620 (0)C
Os05g31160.2 7Oryza sativa5E-6824747630 (0)C
Os07g36250.2 7Oryza sativa2E-6737235584 (4)_
GRMZM2G137498_P01 3.21Zea mays6E-10536947650 (0)M
v1_GRMZM2G137498_P01 4a53Zea mays6E-10536947650 (0)M
Zm00001eb286770_P001 agpv5Zea mays6E-10536947650 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PCRF(1) RF-1(1) TcpS(3)
TargetP: Mitochondria (Class 3 C0.215; M0.798; S0.028; _0.065)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 406 aa (-cTP 376)
Molecular Weight 45.97 kDA(-cTP )
PI 6.74(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1617Detail        [A. thaliana] m48
1618Detail        [A. thaliana] m48
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
1745Detail        [A. thaliana] Col-0
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1934Detail       leaf [A. thaliana] chloroplast wild-type
1937Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1938Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1983Detail       leaf [A. thaliana] plastid wild-type
1986Detail       leaf [A. thaliana] plastid Prep1_Prep2
1987Detail       leaf [A. thaliana] plastid Prep1_Prep2
2132Detail       leaf [A. thaliana] chloroplast fractionation MSH1
2133Detail       leaf [A. thaliana] chloroplast fractionation MSH1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

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