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AT3G57090.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Tetratricopeptide repeat (TPR) protein
Mapman: 26.33* misc. tetratricopeptide repeat (TPR)

Curated Location

mitochondria (Pubmed: 23198870 16510519 16545471 )
peroxisome (Pubmed: 23198870 16510519 16545471 )
plastid (Pubmed: 23198870 16510519 16545471 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G57090.2 11 Arabidopsis thaliana 1E-123 170 100 100 0 (0) _
AT5G12390.1 11 Arabidopsis thaliana 2E-63 168 57 72 0 (0) S
Os05g31770.1 7 Oryza sativa 2E-77 170 66 78 6 (6) _
Os03g24060.1 7 Oryza sativa 1E-76 163 63 80 0 (0) _
Os01g72280.1 7 Oryza sativa 2E-71 170 63 75 0 (0) _
GRMZM2G047097_P01 3.21 Zea mays 4E-80 170 67 82 22 (22) _
Zm00001eb347110_P001 agpv5 Zea mays 4E-80 170 67 82 0 (0) _
Zm00001eb394510_P001 agpv5 Zea mays 2E-73 167 62 77 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(1) Fis1_TPR_C(1) Fis1_TPR_N(1) TPR_10(1) TPR_12(1) TPR_14(2) TPR_2(1)
TargetP:	Cytoplasm (Class 3 C0.056; M0.044; S0.296; _0.867)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	170 aa (-cTP 132)
Molecular Weight	18.70 kDA(-cTP )
PI	5.54(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
342	Detail								leaf [A. thaliana]	chloroplast low density membrane	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
877	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1406	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1408	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1432	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1596	Detail								[A. thaliana]
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20061580(chloroplast envelope (inner+outer))
21173025(root proteome)

Comparative Proteomics Data