PPDB

The Plant Proteome Database

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AT3G57080.1   Eukaryotic rpb5 RNA polymerase subunit family protein

Lab Annot.
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G41340.1 11Arabidopsis thaliana1E-11122170830 (0)_
AT2G41340.3 11Arabidopsis thaliana9E-8718169830 (0)_
AT2G41340.2 11Arabidopsis thaliana1E-8618468830 (0)_
Os12g04510.1 7Oryza sativa3E-6821147700 (0)C
Os11g04730.1 7Oryza sativa3E-6821147700 (0)_
Os04g41040.1 7Oryza sativa2E-4120339603 (3)M
Zm00001eb093130_P001 agpv5Zea mays1E-6321148680 (0)_
GRMZM2G162697_P02 3.21Zea mays1E-6321148680 (0)_
v1_GRMZM2G476009_P01 4a53Zea mays1E-37197395920 (20)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RNA_pol_Rpb5_C(1) RNA_pol_Rpb5_N(2)
TargetP: Cytoplasm (Class 4 C0.047; M0.152; S0.357; _0.680)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 222 aa (-cTP 218)
Molecular Weight 25.59 kDA(-cTP )
PI 9.08(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help