PPDB

The Plant Proteome Database

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AT3G56970.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G56980.1 11Arabidopsis thaliana2E-14025779890 (0)_
AT2G41240.1 11Arabidopsis thaliana2E-8425657730 (0)_
AT2G41240.2 11Arabidopsis thaliana8E-8225657720 (0)_
Os01g72370.2 7Oryza sativa3E-3018840560 (0)_
Os01g72370.1 7Oryza sativa3E-3018840560 (0)_
Os01g72370.3 7Oryza sativa8E-2818840550 (0)_
GRMZM2G057413_P02 3.21Zea mays9E-3015944620 (0)_
v1_GRMZM2G057413_P01 4a53Zea mays9E-3015944620 (0)_
Zm00001eb140680_P001 agpv5Zea mays9E-3015944620 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(2) IL5(2)
TargetP: Cytoplasm (Class 3 C0.035; M0.172; S0.086; _0.741)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 253 aa (-cTP 212)
Molecular Weight 28.71 kDA(-cTP )
PI 5.63(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help