PPDB

The Plant Proteome Database

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AT3G56950.1   small and basic intrinsic protein 2%3B1

Lab Annot.
Mapman: 34.19.4 transport.Major Intrinsic Proteins.SIP
Curated Location
TAIR curated location: endoplasmic reticulum16223486
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G56950.2 11Arabidopsis thaliana3E-1712371001000 (0)S
AT5G18290.1 11Arabidopsis thaliana4E-2424127480 (0)S
AT5G18290.2 11Arabidopsis thaliana4E-2424127480 (0)S
Os03g20410.1 7Oryza sativa6E-7523949670 (0)M
Os01g08660.1 7Oryza sativa1E-2518437530 (0)S
v1_GRMZM2G175038_P01 4a53Zea mays6E-7023150670 (0)M
GRMZM2G175038_P01 3.21Zea mays6E-7023150670 (0)M
Zm00001eb015230_P001 agpv5Zea mays6E-7023150670 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DctQ(3) MaoC_dehydratas(1) MIP(1)
TargetP: Secreted (Class 1 C0.001; M0.063; S0.979; _0.060)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 4 TMs
TAT position:
Length 237 aa (-cTP 163)
Molecular Weight 25.94 kDA(-cTP )
PI 9.57(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


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