PPDB

The Plant Proteome Database

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AT3G56900.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot. Nucleoporin ALADIN
Mapman: 29.3.1 protein.targeting.nucleus
Curated Location nucleus (Pubmed: 21189294 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os12g03540.1 7Oryza sativa044862770 (0)_
Os11g03794.1 7Oryza sativa044761760 (0)_
Os09g39420.1 7Oryza sativa2E-0611832449 (9)_
Zm00001eb405260_P003 agpv5Zea mays044562750 (0)_
GRMZM2G180205_P03 3.21Zea mays044562752 (2)_
v1_GRMZM2G180205_P03 4a53Zea mays0445627519 (19)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(6) eIF2A(3) Sod_Fe_N(1) WD40(4)
TargetP: Cytoplasm (Class 3 C0.194; M0.073; S0.101; _0.709)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 447 aa (-cTP 426)
Molecular Weight 48.49 kDA(-cTP )
PI 5.74(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help