PPDB

The Plant Proteome Database

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AT3G56770.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G41130.1 11Arabidopsis thaliana1E-8825564730 (0)_
AT1G68810.1 11Arabidopsis thaliana1E-3617145710 (0)_
AT3G56770.2 11Arabidopsis thaliana5E-368092920 (0)_
Os03g15440.1 7Oryza sativa3E-3819341660 (0)_
Os09g24490.1 7Oryza sativa5E-2917138600 (0)_
Os08g33590.1 7Oryza sativa5E-2915740630 (0)_
Zm00001eb011370_P001 agpv5Zea mays4E-3818444670 (0)_
Zm00001eb398190_P001 agpv5Zea mays2E-3714450750 (0)_
GRMZM2G043854_P01 3.21Zea mays2E-3714450750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: COG7(1) DUF3006(2) HLH(1)
TargetP: Cytoplasm (Class 4 C0.256; M0.050; S0.074; _0.485)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 230 aa (-cTP 211)
Molecular Weight 25.75 kDA(-cTP )
PI 8.57(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2054Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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