PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G56750.1   plant/protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G41150.2 11Arabidopsis thaliana040482890 (0)S
AT2G41150.1 11Arabidopsis thaliana1E-14625479860 (0)S
AT4G12700.1 11Arabidopsis thaliana4E-1830825420 (0)M
Os03g25110.1 7Oryza sativa1E-16832770830 (0)C
Os07g44700.1 7Oryza sativa2E-13628666800 (0)_
Os10g31810.1 7Oryza sativa2E-1426223436 (6)M
Zm00001eb017860_P002 agpv5Zea mays6E-17033170820 (0)M
GRMZM5G808350_P02 3.21Zea mays6E-17033170820 (0)M
Zm00001eb109900_P003 agpv5Zea mays1E-16534764790 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: O-FucT(1) zf-CCHC_6(1)
TargetP: Mitochondria (Class 4 C0.041; M0.539; S0.256; _0.090)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 403 aa (-cTP 392)
Molecular Weight 46.40 kDA(-cTP )
PI 9.43(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(Golgi)
19546170(mature pollen grains)
18796151(cell wall (hypocotyl))
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
WallDB-E.Jamet(cell wall reference proteome)
22430844(Golgi-cell-culture)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help