PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G56720.2   pre-mRNA-splicing factor

Lab Annot.
Mapman:
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G56720.1 11Arabidopsis thaliana038799990 (0)_
AT3G56720.3 11Arabidopsis thaliana034498990 (0)_
AT3G56720.7 11Arabidopsis thaliana033999990 (0)_
Os10g34660.1 7Oryza sativa5E-3112964700 (0)_
Zm00001eb248330_P003 agpv5Zea mays1E-3011658670 (0)_
Zm00001eb248330_P002 agpv5Zea mays1E-3011658670 (0)_
v1_GRMZM2G139858_P02 4a53Zea mays1E-3011658670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SMAP(1)
TargetP: Cytoplasm (Class 2 C0.255; M0.107; S0.041; _0.861)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 387 aa (-cTP 350)
Molecular Weight 44.07 kDA(-cTP )
PI 9.40(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help