PPDB

The Plant Proteome Database

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AT3G56710.1   sigma factor binding protein 1

Lab Annot. SibI - Sig1 interacting factor
Mapman: 27.2 RNA.transcription
Curated Location plastid stroma (Pubmed: 23198870 11943170 18431481 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G56710.2 11Arabidopsis thaliana4E-1101511001000 (0)C
AT2G41180.1 11Arabidopsis thaliana1E-4315255670 (0)C
Os01g59410.1 7Oryza sativa6E-093275870 (0)_
Os05g32460.1 7Oryza sativa8E-093275870 (0)_
AC203294.3_FGP012 3.21Zea mays5E-104163750 (0)C
v1_AC203294.3_FGP012 4a53Zea mays5E-104163750 (0)C
Zm00001eb369260_P001 agpv5Zea mays6E-104163750 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: VQ(1)
TargetP: Chloroplast (Class 3 C0.951; M0.017; S0.013; _0.437)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 151 aa (-cTP 97)
Molecular Weight 16.86 kDA(-cTP 10.79)
PI 5.39(-cTP 3.94)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19995723(chloroplast reference proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help