PPDB

PPDB	The Plant Proteome Database

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AT3G56550.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G56550.2 11 Arabidopsis thaliana 0 581 100 100 0 (0) _
AT4G21065.1 11 Arabidopsis thaliana 2E-145 586 38 60 0 (0) S
AT5G66520.1 11 Arabidopsis thaliana 1E-140 602 36 53 4 (4) _
Os07g44299.1 7 Oryza sativa 6E-135 577 39 57 0 (0) _
Os03g58100.1 7 Oryza sativa 2E-133 579 37 56 0 (0) C
Os07g05560.1 7 Oryza sativa 2E-129 582 37 56 0 (0) M
v1_GRMZM2G099604_P01 4a53 Zea mays 1E-131 578 39 56 2 (2) C
GRMZM2G099604_P01 3.21 Zea mays 1E-131 578 39 56 4 (4) C
Zm00001eb213020_P001 agpv5 Zea mays 1E-131 578 39 56 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DYW_deaminase(1) PPR(8) PPR_1(7) PPR_2(7) PPR_3(6) PPR_long(3) PYRIN(1) Rep_fac_
TargetP:	Cytoplasm (Class 4 C0.053; M0.314; S0.003; _0.610)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	581 aa (-cTP 534)
Molecular Weight	64.89 kDA(-cTP )
PI	8.35(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data