PPDB

 The Plant Proteome Database

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AT3G56510.1   RNA-binding (RRM/RBD/RNP motifs) family protein
Lab Annot.
Mapman: 27.3.51 RNA.regulation of transcription.General Transcription, TBP-binding protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G56510.4 11Arabidopsis thaliana02571001000 (0)_
AT3G56510.3 11Arabidopsis thaliana02571001000 (0)_
AT3G56510.5 11Arabidopsis thaliana02571001000 (0)_
Os07g46760.1 7Oryza sativa2E-7221752680 (0)_
Os07g46760.2 7Oryza sativa8E-6316358740 (0)_
Os05g03870.1 7Oryza sativa4E-064351720 (0)_
v1_GRMZM2G131467_P02 4a53Zea mays2E-7220954702 (2)_
v1_GRMZM2G131467_P01 4a53Zea mays2E-7220954702 (2)_
GRMZM2G131467_P02 3.21Zea mays2E-7220954700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: LicD(2) RRM_1(1)
TargetP: Cytoplasm (Class 1 C0.101; M0.054; S0.066; _0.967)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 257 aa (-cTP 243)
Molecular Weight 29.52 kDA(-cTP )
PI 9.56(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help