PPDB

PPDB	The Plant Proteome Database

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AT3G56440.1 yeast autophagy 18 D-like protein

Lab Annot.

ATG18d - (ATG9/2/18 complex)
Mapman: 29.5.2 protein.degradation.autophagy

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G56440.2 11 Arabidopsis thaliana 0 361 100 100 0 (0) _
AT2G40810.1 11 Arabidopsis thaliana 0 377 85 91 0 (0) _
AT2G40810.2 11 Arabidopsis thaliana 0 377 85 91 0 (0) _
Os01g07400.2 7 Oryza sativa 0 391 69 83 0 (0) C
Os01g07400.1 7 Oryza sativa 0 391 69 83 0 (0) C
Os05g07710.3 7 Oryza sativa 3E-156 367 58 72 0 (0) _
Zm00001eb336470_P002 agpv5 Zea mays 0 371 71 84 0 (0) _
v1_GRMZM2G143211_P01 4a53 Zea mays 0 371 71 84 0 (0) _
GRMZM2G143211_P01 3.21 Zea mays 0 371 71 84 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(4) DUF5711(2) Ge1_WD40(3) WD40(3)
TargetP:	Cytoplasm (Class 3 C0.058; M0.296; S0.035; _0.794)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	391 aa (-cTP 365)
Molecular Weight	43.89 kDA(-cTP )
PI	6.50(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data